Epichloe mitochondrial genome self-splicing introns

This repository includes supplementary data 1-5 for the paper "An alternative self-splicing intron lifecycle revealed by dynamic intron turnover in Epichloë endophyte mitochondrial genomes" by Chan et al.

Supplementary data 1 are the alignments of all the self-splicing introns analysed in this study.

Supplementary data 2 are the phylogenetic reconstructions, the ancestral reconstruction data and roostrap trees for the various phylogenies, and an alignment of the E. canadensis hybrid mitochondrial genome with its parental isolates.

Supplementary data 3 are matrices of pairwise distances between isolates for all introns.

Supplementary data 4 are alignments of the translated self-splicing intron genes for each intron analysed.

Corressponding author is Austen Ganley (e-mail a.ganley@auckland.ac.nz)