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Tuatara rDNA unit size files

dataset
posted on 27.04.2021, 08:13 by Emma Macdonald
reads_analysed file contains raw nanopore reads extracted from a nanopore dataset readsf or the
Tuatara (NCBI accession PRJNA445603) in FASTA format used to determine rDNA unit size.

Con_reads files contain nanopore reads individual rDNA unit sequences were extracted from to generate the consensus sequence in FASTA format for the sole extant rhynchocephalia species (Tuatara).

Con_indiv_units files contain individual rDNA unit sequences extracted from nanopore reads used to generate the consensus sequence in FASTA format for the sole extant rhynchocephalia species (Tuatara).

Consensus_alignment files contains the alignement output in .geneious format.

Annotated_Consensus files contains the annotated consensus sequences in .geneious format.

align_Tuatara_con_with_ref file contains the rDNA consensus sequence aligned to a reference sequence (Genbank accession X02995).
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Average rDNA unit size was generated using the included excel spreadsheet.

History

Publisher

University of Auckland

Exports

Faculty of Science

Categories

Exports