RepeatMasker analysis of Human long and short consensus sequences.

dataset

posted on 2021-04-27, 08:15 authored by Emma MacdonaldEmma Macdonald

RepeatMasker outpus (RM2_Human..._IGS.align) were used to annotate the long and short human rDNA consensus units (Repeat_annotated_Human_rDNA_consensus_long/short.geneious) generated using nanopore reads (NCBI accession PRJNA200694).

The repeat-annotated long and short consensus sequences were aligned to compare repeat number, size and position (Human_Long_Consensus_aligned_with_Human_Short_Consensus).