.GZ
Platypus_rDNA_assembly_reads.fasta.gz (2.45 MB)
.GENEIOUS
Platypus_sequence_selection_assembly_annotated_contig_3.geneious (12.73 kB)
.GENEIOUS
align_platypus_complete_rDNA_unit_seqsel_assembly_with_ref.geneious (24.08 kB)
.GENEIOUS
Platypus_complete_rDNA_Sequence_Selection_Assembly.geneious (10.6 kB)
.GENEIOUS
Platypus_Sequence_assembly_partial_sequences.geneious (6.77 kB)
.GENEIOUS
Platypus_partial_rDNA_unit_aligned_with_full_rDNA_unit.geneious (27.77 kB)
.GENEIOUS
Alignment_of_patial_IGs_with_first_5kb_complete_platypus_IGS.geneious (7.23 kB)
.GENEIOUS
alignments_of_probable_platrDNA_with_plat_seqsel_assembly_genes.geneious (3.7 kB)
1/0
Platypus PacBio assembly
Version 2 2021-04-27, 22:22
Version 1 2021-04-27, 08:15
dataset
posted on 2021-04-27, 22:22 authored by Emma MacdonaldEmma MacdonaldFiles containing PacBio reads selected by BLAST to generate assembly of a complete rDNA (Platypus_rDNA_assembly_reads.fasta.gz), annotated assembly contig (Platypus_sequence_selection_assembly_annotated_contig_3.geneious), annotated complete assembly (Platypus_complete_rDNA_Sequence_Selection_Assembly.geneious) and partial units (Platypus_Sequence_assembly_partial_sequences.geneious).
Alignment of the complete contig rDNA unit to a reference gene (GL000220; see Agrawal & Ganley, 2018): (align_platypus_complete_rDNA_unit_seqsel_assembly_with_ref.geneious)
Alignment of the complete rDNA unit to a reference gene (Floutsokou et al 2013): (align_platypus_complete_rDNA_unit_seqsel_assembly_with_ref.geneious)
Alignment of the partial (28S) rDNA unit to complete rDNA unit from the assembly:
(Platypus_partial_rDNA_unit_aligned_with_full_rDNA_unit. genious)
Alignments of probable rRNA genes to assembled rRNA genes (alignments_of_probable_platrDNA_with_plat_seqsel_assembly_genes.geneious).
Probable 18S rRNA: GenBank accession AJ311679.1
Probable 5.8S rRNA: GenBank accession XR_003764684
