Human_Corneal_Endothelium.csv (100.45 MB)

Measurements of ex vivo human corneal endothelium using Voronoi segmentation.

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dataset
posted on 14.12.2017 by Nigel H. Brookes
This dataset of size and shape measurements of 354,998 human corneal endothelial cells, from 2000 routine assessment images, from a sequential series of 678 corneas from 351 donors, was collected with consent by the New Zealand National Eye Bank over several years, after organ-culture storage but prior to release for transplantation. The measurement methodology using Voronoi segmentation is detailed in:

Brookes NH. Morphometry of organ-cultured corneal endothelium using Voronoi segmentation. Cell Tiss Bank. 2017; 18: 167-183. https://doi.org/10.1007/s10561-017-9622-9 PMID: 28374155.

Dataset structure:

1. Dataset ID
2. Image Number
3. Image - Mean Cell Area (µm^2)
4. Image - Standard Error of the Mean (SEM) Cell Area (µm^2)
5. Image - Total Cell Area (µm^2)
6. Image - Cell Area Coefficient of Variation (CV)
7. Image - Mean Cell Density (cells/mm^2)
8. Image - SEM Cell Density (cells/mm^2)
9. Image - 4-Sides Cell Count
10. Image - 5-Sides Cell Count
11. Image - 6-Sides Cell Count
12. Image - 7-Sides Cell Count
13. Image - 8-Sides Cell Count
14. Image - 9-Sides Cell Count
15. Image - 4-Sides Cell Area (µm^2)
16. Image - 5-Sides Cell Area (µm^2)
17. Image - 6-Sides Cell Area (µm^2)
18. Image - 7-Sides Cell Area (µm^2)
19. Image - 8-Sides Cell Area (µm^2)
20. Image - 9-Sides Cell Area (µm^2)
21. Image - 4-Sides % Area
22. Image - 5-Sides % Area
23. Image - 6-Sides % Area
24. Image - 7-Sides % Area
25. Image - 8-Sides % Area
26. Image - 9-Sides % Area
27. Image - Total Cells
28. Image - Mean Hexagonal Cell Regularity
29. Image - SEM Hexagonal Cell Regularity
30. Image - Number of Pleomorphs
31. Image - Mean Cell Sides
32. Image - SEM Cell Sides
33. Image - Cell Sides CV
34. Image - Mean Shape Index
35. Image - SEM Shape Index
36. Cell Number
37. Cell - Cell Area (µm^2)
38. Cell - Number of Sides
39. Cell - Hexagonal Cell Regularity
40. Cell - Shape Index

History

Publisher (e.g. University of Auckland)

University of Auckland

Contact email

n.brookes@auckland.ac.nz

Licence

Exports