Human rDNA unit size
datasetposted on 27.04.2021, 08:14 authored by Emma MacdonaldEmma Macdonald
Raw_read file contains nanopore reads in FASTA format analysed from a nanopore dataset (PRJNA200694) used to determine rDNA unit size for Humans.
Con_reads files contain raw nanopore reads individual rDNA unit sequences were extracted from to generate the long and short consensus sequence in FASTA format.
Con_indiv_units files contain individual rDNA unit sequences extracted from nanopore reads used to generate the long and short consensus sequence in FASTA format.
Consensus_alignment files contains the alignement output in .geneious format.
Annotated_Consensus files contains the two annotated consensus sequences in .geneious format.
align_Human_long/short_con_with_ref file contains the rDNA consensus sequence aligned to a reference sequence (NCBI accession GL000220; see Agrawal & Ganley, 2018).
Average rDNA unit size was generated using the included excel spreadsheet.