.GZ
all_human_anlaysed_reads.fasta.gz (1.55 MB)
.GZ
Human_long_con_reads.fasta.gz (362.02 kB)
.GZ
Human_Long_Consensus_rDNA_Individual_units.fasta.gz (173.49 kB)
.GENEIOUS
Human_long_con_alignment.geneious (543.78 kB)
.GENEIOUS
align_Human_long_with_ref.geneious (60.94 kB)
.GZ
Human_short_con_reads.fasta.gz (211.31 kB)
.GZ
Human_Short_Consensus_Individual_units.fasta.gz (149.1 kB)
.GENEIOUS
annotated_Human_long_and_short_consensus_sequences.geneious (30.96 kB)
.GENEIOUS
align_Human_short_with_ref.geneious (60.57 kB)
.GENEIOUS
Human_short_con_alignment.geneious (455.98 kB)
DATASET
Human_rDNA_unit_measuring_spreadsheet.xlsx (26.73 kB)
1/0
Human rDNA unit size
Raw_read file contains nanopore reads in FASTA format analysed from a nanopore dataset (PRJNA200694) used to determine rDNA unit size for Humans.
Con_reads files contain raw nanopore reads individual rDNA unit sequences were extracted from to generate the long and short consensus sequence in FASTA format.
Con_indiv_units files contain individual rDNA unit sequences extracted from nanopore reads used to generate the long and short consensus sequence in FASTA format.
Consensus_alignment files contains the alignement output in .geneious format.
Annotated_Consensus files contains the two annotated consensus sequences in .geneious format.
align_Human_long/short_con_with_ref file contains the rDNA consensus sequence aligned to a reference sequence (NCBI accession GL000220; see Agrawal & Ganley, 2018).
Average rDNA unit size was generated using the included excel spreadsheet.
