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Go with the flow: Population connectivity of the NZ scampi – raw data.

Version 4 2021-09-05, 03:18
Version 3 2021-04-30, 12:29
Version 2 2021-01-21, 19:18
Version 1 2021-01-19, 02:36
dataset
posted on 2021-09-05, 03:18 authored by Aimee van der ReisAimee van der Reis, Andrew JeffsAndrew Jeffs, Craig NorrieCraig Norrie, Shane LaveryShane Lavery, Emma CarrollEmma Carroll
<div>This is the raw GBS and particle modelling data that has been used in the article "Go with the flow: Population connectivity of the New Zealand deep sea lobster, <i>Metanephrops challengeri</i>".</div><div><br></div>'NZ_scampi_GBS.tar.gz' are the raw sequencing files for each scampi individual used for the population genetics section of this study.<div><br></div><div>'NETCDF_data.zip' are the raw NETCDF files used for the hydrodynamic particle modelling section of this study.</div><div><br></div><div>'Haplotypic_data.vcf' is the Stacks <i>de novo</i> output file from the raw data (NZ_scampi_GBS.tar.gz ).</div><div><br></div><div>NCBI Sequence Read Archive (SRA): <a href="http://www.ncbi.nlm.nih.gov/bioproject/760674">http://www.ncbi.nlm.nih.gov/bioproject/760674</a></div><div>Please note that the SRA data does NOT differ from the data uploaded here. The SRA metadata files (sample and NGS) have also been uploaded here.</div>

Funding

This funded study was part of Ka Hao te Rangatahi: Revolutionary Potting Technologies and Aquaculture for Scampi (CAWX1316) funded by the New Zealand Ministry of Business Innovation and Employment, and led by Shaun Ogilvie.

History

Publisher

University of Auckland