Chapter 3 Supplementary Files

Supplementary Table 1: Number of participants in each group at each timepoint in the Gut Bugs Trial

Supplementary Table 2: Metadata for subset of FOCUS Trial samples selected for analysis

Supplementary Table 3: Number of contigs with horizontal gene transfer (HGT) per sample from the WAAFLE output (Gut Bugs Trial)

Supplementary Table 4: Number of contigs with horizontal gene transfer (HGT) per sample from the WAAFLE output (FOCUS Trial)