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Cane toad rDNA unit size

dataset
posted on 27.04.2021, 08:14 by Emma Macdonald
Raw read files contain nanopore reads in FASTA format used to determine rDNA unit size for the Cane toad (kindly provided by Dr Richard Edwards of The University of New South Wales, Sydney, Australia).

Con_reads files contain raw nanopore reads individual rDNA unit sequences were extracted from to generate the long and short consensus sequence in FASTA format.

Con_indiv_units files contain individual rDNA unit sequences extracted from nanopore reads used to generate the long and short consensus sequence in FASTA format.

Consensus_alignment files contains the alignement output in .geneious format.

Annotated_Consensus files contains the two annotated consensus sequences in .geneious format.

align_Human_long/short_con_with_ref file contains the rDNA consensus sequence aligned to a reference sequence (X02995).

Average rDNA unit size was generated using the included excel spreadsheet.

History

Publisher

University of Auckland

Exports

Faculty of Science

Categories

Exports