%0 Computer Program %A Thomson, Geoffrey %D 2018 %T The transcriptomic response to a short day to long day shift in leaves of the reference legume Medicago truncatula (Code supplement) %U https://auckland.figshare.com/articles/software/Thomson_et_al_2018_SDtoLDShiftAnalysis/6993641 %R 10.17608/k6.auckland.6993641.v5 %2 https://auckland.figshare.com/ndownloader/files/13485995 %K RNA-Seq datasets %K FLOWERING LOCUS T %K Medicago truncatula %K flowering time regulation %K Genomics %K Plant Biology %K Plant Developmental and Reproductive Biology %K Gene Expression (incl. Microarray and other genome-wide approaches) %X
Processed data and R code sufficient to reproduce the analysis in "The transcriptomic response to a short day to long day shift in the reference legume Medicago truncatula" by Thomson et al. (2019).

Combines two similar experiments where plants were grown in short-day photoperiods and shifted to long-day photoperiods after 10 days. Triplicate RNA-seq libraries from both short-day and long-day leaf tissue were generated in experiment 1 at ZT0 and ZT4 at 13 days. In experiment 2 at ZT4 at 15 days.
%I The University of Auckland